Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946428.1_cds_XP_016488569.1_79189
CDS Infomation

[gene=LOC107808551] [db_xref=GeneID:107808551] [protein=anaphase-promoting complex subunit 5-like] [protein_id=XP_016488569.1] [location=join(48511..48684,49369..49528,49617..49738,50001..50250,51176..51353,51437..51515,51605..51690,53693..53825,54009..54041,55696..56010)] [gbkey=CDS]
Sequence

ATGGCAGGGATATCGAAGGCGGCGCCGGGAGCATTCACGATAACACCACACAAGCTCTCA
ATTTGCATTCTCATTCAAGTCTATGCTCCTCCCTCCCAAACCTCTGTCCCTTTCCCTTTC
TCTTCCGTCTCTCAACACAATCTCCTTGCCTCCTTCTTATTATCTCTCACTAAGTCTTCT
GAGGATATTTTTGAGCCAAAGCTGGATGAACTCATCTCACAGCTGAATGAAATTGGAGGC
GTACTGAAGCATTGGTTGAGCGACCATTTAGCTGGAAAGCTATCATCTTTAGCCTCACCA
GACGATTTGTTTAACTTTTTTAATGGCTTGCGAGGCATACTTGGGGGTTCTGATTCAAAT
GCCATGGATGACGATCAAATCATTTTGGATCCTAGCAGCAATCTTGGAGTCTTTGTTCGT
CGTTGCTTACTTGCGTTTAATCTGTTGTCCTTTGAGGCTGTCTGTCATCTTTTGACAAAT
GTAGCAACATATTGCAAGGAATCTCTCTCGGCTTATCCTCCTTATGAGTTATCACATTTT
AACGATTCTGATAGCTATACTGAAGCACCAAAGCACTATGAGAACATGGATTTGGAGAAT
TTTGTTGTTGAGAAAGTCAACAAAGAAATCGAAGCGAGAAATGTGGTTGATGAAAAGCTT
TCCTTCCACAATCATGCACCTAAAGCTCTAGTTAGATCAATTGAAGATCGTTATTCTTCT
CCCGGGCCACAAATTAAAAGAATCACTAAGCCAAGAGAAGTTAGCACATGCGCATCTTCT
TCTTGTGATGCATCGGATTGTGTTGATTCTCAGACTGGAGCGTTCTTACGTACAAATTGG
CAAATACAAGGATATCTCTTGGAGCAAGCTGATACAATTGAAAGGCAGGGAAGCTCCTTC
ACTCTCAATGCTTTTGAGTCTGTATTGAAGGACCTTCTTAAATTAGCTCCAGAGTTACAT
CGCGTTCACTTCTTGCGTTACTTGAATAGCCTTTATCATCAGGACTATCATACTGCTCTA
GAAAATATCCACCGGTATTTTGATTACAGTGCAGGGACGGAAGGATGTGATTTTATACCT
TCTTCTTCAACCGGTTGCAGTAGCTTTGGGAGATATGAAGTTGCTTTATTATGCTTGGGA
ATGATGCATTTTCATTTTGGGCACCCAAAGCAAGCTTTGGAGGTGTTGACAGAAGCTGTT
CGTGTGTCTCAACAGCAAAATAATGATAGTTGTCTTGCTTACACGTTAGCAGCAATTTGC
AAGCTATTGTCTGAATTTGGAGTCTCAAATATGAGGGGGCTTATCGGATCATCCTATTCA
CCTGTAACCAGTATAGGAACTTCATTATCCACTCAACAACTCTTATATGTTCTCTTGAGA
AGATCCTTAAAGCGAGCGGAAAGTCTAAAGCTGAAACGACTGGTTGCATCTAATCATCTT
GCCATGGCTAAATTCGACCTGACTGTAAGCACTTTAATCACTCTCTTGTTTATGCATTGC
AGTGACCAAATAATTAATGGTGATTTTTAA

Peptide Sequence

PEP ID

XP_016488569.1
PEP Infomation

PREDICTED: anaphase-promoting complex subunit 5-like [Nicotiana tabacum]
Sequence

MAGISKAAPGAFTITPHKLSICILIQVYAPPSQTSVPFPFSSVSQHNLLASFLLSLTKSS
EDIFEPKLDELISQLNEIGGVLKHWLSDHLAGKLSSLASPDDLFNFFNGLRGILGGSDSN
AMDDDQIILDPSSNLGVFVRRCLLAFNLLSFEAVCHLLTNVATYCKESLSAYPPYELSHF
NDSDSYTEAPKHYENMDLENFVVEKVNKEIEARNVVDEKLSFHNHAPKALVRSIEDRYSS
PGPQIKRITKPREVSTCASSSCDASDCVDSQTGAFLRTNWQIQGYLLEQADTIERQGSSF
TLNAFESVLKDLLKLAPELHRVHFLRYLNSLYHQDYHTALENIHRYFDYSAGTEGCDFIP
SSSTGCSSFGRYEVALLCLGMMHFHFGHPKQALEVLTEAVRVSQQQNNDSCLAYTLAAIC
KLLSEFGVSNMRGLIGSSYSPVTSIGTSLSTQQLLYVLLRRSLKRAESLKLKRLVASNHL
AMAKFDLTVSTLITLLFMHCSDQIINGDF

Transcript Sequence

Gene sequence data has not been registered.